C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: COMM domain containing 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000065358 Commd4-201 ENSMUSG00000032299 10090 - 9:57155041-57158299 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000065358
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000065358 42.352±5.24 51.900±13.05 35.610±6.22 47.531±22.36 44.040±14.49 48.657±4.17 15.671±2.41 50.905±7.26 31.709±7.30 34.558±4.18 17.183±1.84 45.167±14.37 47.218±25.17 7.306±3.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00045U CIL_00045U_0002 CGP 9:57142800-57158299

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000267935 COMMD4-001 protein_coding Homo_sapiens 0 689
ENST00000338995 COMMD4-005 protein_coding Homo_sapiens 0 470
ENST00000480484 COMMD4-002 nonsense_mediated_decay Homo_sapiens 0 689
ENST00000561662 COMMD4-017 processed_transcript Homo_sapiens 1e-29 134
ENST00000562310 COMMD4-025 retained_intron Homo_sapiens 0 424
ENST00000562610 COMMD4-012 nonsense_mediated_decay Homo_sapiens 0 388
ENST00000562789 COMMD4-020 protein_coding Homo_sapiens 0 359
ENST00000563220 COMMD4-009 retained_intron Homo_sapiens 7e-22 110
ENST00000563867 RP11-114H24.4-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 427
ENST00000564068 COMMD4-007 retained_intron Homo_sapiens 4e-22 111
ENST00000564587 COMMD4-014 retained_intron Homo_sapiens 0 195
ENST00000564815 COMMD4-011 protein_coding Homo_sapiens 0 497
ENST00000565063 RP11-247C2.1-001 unprocessed_pseudogene Homo_sapiens 0 409
ENST00000565517 COMMD4-016 retained_intron Homo_sapiens 0 372
ENST00000565834 COMMD4-008 retained_intron Homo_sapiens 2e-22 111
ENST00000566230 COMMD4-015 retained_intron Homo_sapiens 4e-24 115
ENST00000566843 COMMD4-004 retained_intron Homo_sapiens 2e-23 115
ENST00000567023 COMMD4-006 retained_intron Homo_sapiens 0 246
ENST00000567195 COMMD4-010 protein_coding Homo_sapiens 0 392
ENST00000567377 COMMD4-019 protein_coding Homo_sapiens 0 353
ENST00000567399 COMMD4-022 retained_intron Homo_sapiens 8e-24 115
ENST00000567720 COMMD4-013 nonsense_mediated_decay Homo_sapiens 0 342
ENST00000568034 COMMD4-018 retained_intron Homo_sapiens 4e-22 110
ENST00000568301 COMMD4-021 protein_coding Homo_sapiens 0 621
ENST00000568877 COMMD4-023 retained_intron Homo_sapiens 0 387
ENST00000569245 COMMD4-024 retained_intron Homo_sapiens 0 579
ENST00000569853 RP11-1006G14.3-001 unprocessed_pseudogene Homo_sapiens 0 411

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