C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tubulin folding cofactor E-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000066148 Tbcel-001 ENSMUSG00000037287 10090 - 9:42412316-42472258 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000066148
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000066148 2.735±0.92 3.963±1.23 5.169±0.06 2.005±0.74 1.430±0.65 1.757±0.81 1.678±0.75 6.081±1.92 2.264±0.40 4.096±0.75 2.384±1.43 2.131±0.80 1.374±0.99 7.560±1.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003CG CIL_0003CG_0002 CGP 9:42329619-42507809

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005829 TAS cytosol
GO:0005856 IEA cytoskeleton
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000284259 TBCEL-002 nonsense_mediated_decay Homo_sapiens 0 1264
ENST00000422003 TBCEL-001 protein_coding Homo_sapiens 0 1760
ENST00000524726 TBCEL-006 protein_coding Homo_sapiens 0 920
ENST00000529397 TBCEL-005 protein_coding Homo_sapiens 0 1585
ENST00000531148 TBCEL-003 nonsense_mediated_decay Homo_sapiens 0 793
ENST00000533134 TBCEL-008 protein_coding Homo_sapiens 0 475
ENST00000533169 TBCEL-009 retained_intron Homo_sapiens 0 1081
ENST00000533712 TBCEL-007 nonsense_mediated_decay Homo_sapiens 0 490

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