C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lipin 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000067124 Lpin1-201 ENSMUSG00000020593 10090 - 12:16535669-16589770 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000067124
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000067124 50.244±24.87 28.274±3.93 2.569±0.35 1.055±0.00 52.233±9.59 2.434±1.18 31.589±4.10 17.093±0.76 7.365±3.57 12.714±1.11 6.539±1.04 7.813±3.62 0.806±0.31 28.115±6.85

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IGI negative regulation of transcription from RNA polymerase II promoter
GO:0000266 IDA mitochondrial fission
GO:0001085 IDA RNA polymerase II transcription factor binding
GO:0003713 IDA transcription coactivator activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005667 IDA transcription factor complex
GO:0005737 IDA cytoplasm
GO:0005741 IEA mitochondrial outer membrane
GO:0005783 IEA endoplasmic reticulum
GO:0006351 IEA transcription, DNA-templated
GO:0006629 IMP lipid metabolic process
GO:0006642 IDA triglyceride mobilization
GO:0008195 IDA phosphatidate phosphatase activity
GO:0009062 IEA fatty acid catabolic process
GO:0016311 IEA dephosphorylation
GO:0019432 IEA triglyceride biosynthetic process
GO:0031065 IMP positive regulation of histone deacetylation
GO:0031100 IEA organ regeneration
GO:0031529 IMP ruffle organization
GO:0031532 IMP actin cytoskeleton reorganization
GO:0031965 IDA nuclear membrane
GO:0032869 IMP cellular response to insulin stimulus
GO:0042826 IDA histone deacetylase binding
GO:0042975 IPI peroxisome proliferator activated receptor binding
GO:0045444 NAS fat cell differentiation
GO:0045598 IMP regulation of fat cell differentiation
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:2001141 IDA regulation of RNA biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000256720 LPIN1-001 protein_coding Homo_sapiens 0 1868
ENST00000396097 LPIN1-201 protein_coding Homo_sapiens 0 2614
ENST00000396098 LPIN1-004 protein_coding Homo_sapiens 0 1074
ENST00000396099 LPIN1-003 nonsense_mediated_decay Homo_sapiens 0 2580
ENST00000404113 LPIN1-005 processed_transcript Homo_sapiens 0 1868
ENST00000425416 LPIN1-202 protein_coding Homo_sapiens 0 1868
ENST00000449576 LPIN1-019 protein_coding Homo_sapiens 0 2614
ENST00000454151 LPIN1-010 protein_coding Homo_sapiens 0 401
ENST00000464953 LPIN1-009 retained_intron Homo_sapiens 0 313
ENST00000475922 LPIN1-002 retained_intron Homo_sapiens 0 457
ENST00000487576 LPIN1-018 processed_transcript Homo_sapiens 9.80909e-45 183

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