C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Rho guanine nucleotide exchange factor (GEF) 33
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000068175 Arhgef33-201 ENSMUSG00000054901 10090 + 17:80307407-80388688 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000068175
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000068175 0.090±0.04 0.124±0.09 0.049±0.00 0.279±0.03 0.041±0.01 0.068±0.03 0.021±0.01 0.059±0.04 0.015±0.01 0.074±0.06 0.012±0.00 0.215±0.12 0.111±0.09 1.953±0.59

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00067N CIL_00067N_0002 CGP 17:80290212-80388688

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005089 IEA Rho guanyl-nucleotide exchange factor activity
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0032321 IEA positive regulation of Rho GTPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000398800 ARHGEF33-201 protein_coding Homo_sapiens 0 2959
ENST00000409978 ARHGEF33-001 protein_coding Homo_sapiens 0 2961
ENST00000411874 ARHGEF33-006 protein_coding Homo_sapiens 0 726
ENST00000430382 ARHGEF33-005 processed_transcript Homo_sapiens 0 283
ENST00000433605 ARHGEF33-004 protein_coding Homo_sapiens 0 459
ENST00000483305 ARHGEF33-003 processed_transcript Homo_sapiens 0 300
ENST00000486958 ARHGEF33-007 retained_intron Homo_sapiens 0 340

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