C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: neogenin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000068664 Neo1-201 ENSMUSG00000032340 10090 - 9:58874679-59036441 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000068664
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000068664 7.005±3.88 13.040±2.50 6.444±1.09 14.784±7.24 5.986±3.56 13.701±2.90 4.818±2.43 4.900±1.61 0.893±0.58 8.963±2.72 1.759±0.83 13.247±5.12 1.347±0.77 2.026±0.70

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004872 IPI receptor activity
GO:0006355 IDA regulation of transcription, DNA-templated
GO:0007520 IMP myoblast fusion
GO:0016021 IEA integral component of membrane
GO:0045296 IDA cadherin binding
GO:0055072 IEA iron ion homeostasis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000261908 NEO1-201 protein_coding Homo_sapiens 0 5321
ENST00000339362 NEO1-001 protein_coding Homo_sapiens 0 5321
ENST00000558807 NEO1-009 retained_intron Homo_sapiens 0 326
ENST00000558886 NEO1-011 retained_intron Homo_sapiens 0 584
ENST00000558964 NEO1-004 protein_coding Homo_sapiens 0 2542
ENST00000560262 NEO1-003 protein_coding Homo_sapiens 0 3326
ENST00000560328 NEO1-002 protein_coding Homo_sapiens 0 2732
ENST00000560352 NEO1-008 processed_transcript Homo_sapiens 0 660
ENST00000560407 NEO1-006 processed_transcript Homo_sapiens 0 394
ENST00000560808 NEO1-010 retained_intron Homo_sapiens 0 1382

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