C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: eukaryotic translation initiation factor 2D
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000068805 Eif2d-006 ENSMUSG00000026427 10090 + 1:131153181-131173478 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000068805
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000068805 13.333±3.95 15.337±3.47 21.443±2.42 12.462±3.22 7.345±1.03 11.294±1.70 10.036±2.19 13.621±3.23 13.284±3.49 8.624±1.82 11.816±1.08 13.790±4.62 20.213±4.96 5.523±2.68

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001731 IEA formation of translation preinitiation complex
GO:0002192 IEA IRES-dependent translational initiation
GO:0003743 ISS translation initiation factor activity
GO:0005634 IEA nucleus
GO:0005737 ISS cytoplasm
GO:0006413 IEA translational initiation
GO:0022627 IEA cytosolic small ribosomal subunit
GO:0032790 IEA ribosome disassembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000271764 EIF2D-001 protein_coding Homo_sapiens 0 1173
ENST00000367114 EIF2D-002 protein_coding Homo_sapiens 0 1020
ENST00000468891 EIF2D-011 retained_intron Homo_sapiens 0 394
ENST00000484492 EIF2D-007 nonsense_mediated_decay Homo_sapiens 0 279
ENST00000613435 EIF2D-010 nonsense_mediated_decay Homo_sapiens 0 283
ENST00000617960 EIF2D-004 retained_intron Homo_sapiens 0 283

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