C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: avian musculoaponeurotic fibrosarcoma (v-maf) AS42 oncogene homolog
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000069009 Maf-001 ENSMUSG00000055435 10090 - 8:115682942-115707096 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000069009
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000069009 5.922±1.18 4.926±0.09 2.639±1.01 5.278±1.70 1.329±0.16 0.713±0.24 7.355±0.71 1.256±0.36 1.882±0.45 21.459±5.70 6.237±2.02 1.813±1.26 0.371±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001PE CIL_0001PE_0002 CGP 8:114439655-115707794
CIL_0007WU CIL_0007WU_0002 VISTA 8:115173042-115774528
CIL_0003Z4 CIL_0003Z4_0002 CGP 8:115682942-116515896

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IMP negative regulation of transcription from RNA polymerase II promoter
GO:0001228 IDA RNA polymerase II transcription regulatory region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0001816 IDA cytokine production
GO:0002088 IMP lens development in camera-type eye
GO:0003677 IDA DNA binding
GO:0003700 IDA sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IMP regulation of transcription, DNA-templated
GO:0010628 IDA positive regulation of gene expression
GO:0032330 IMP regulation of chondrocyte differentiation
GO:0043565 IDA sequence-specific DNA binding
GO:0045944 IMP positive regulation of transcription from RNA polymerase II promoter
GO:0048468 IMP cell development
GO:0048839 IDA inner ear development
GO:0070306 IMP lens fiber cell differentiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000111861 MAF (2 of 2)-201 protein_coding Danio_rerio 0 497
ENSDART00000014703 maf-001 protein_coding Danio_rerio 0 446
ENSDART00000127651 maf-201 protein_coding Danio_rerio 0 436
ENST00000326043 MAF-001 protein_coding Homo_sapiens 0 2037
ENST00000333480 MAFA-001 protein_coding Homo_sapiens 0 213
ENST00000393350 MAF-002 protein_coding Homo_sapiens 0 2041
ENST00000528185 MAFA-002 processed_transcript Homo_sapiens 0 206
ENST00000569649 MAF-003 protein_coding Homo_sapiens 0 1779

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