C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAB3 GTPase activating protein subunit 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000069652 Rab3gap2-201 ENSMUSG00000039318 10090 + 1:185204168-185286743 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000069652
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000069652 6.612±2.42 14.424±1.90 2.679±0.00 6.366±3.50 6.045±1.22 5.576±1.70 3.012±0.34 4.496±0.76 3.377±1.28 5.903±1.25 2.800±0.39 7.051±2.27 6.019±2.36 2.068±0.58

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0005886 IEA plasma membrane
GO:0017112 IEA Rab guanyl-nucleotide exchange factor activity
GO:0017137 IEA Rab GTPase binding
GO:0032851 IEA positive regulation of Rab GTPase activity
GO:0043087 IEA regulation of GTPase activity
GO:0043234 IEA protein complex
GO:0097051 IEA establishment of protein localization to endoplasmic reticulum membrane
GO:1903373 IEA positive regulation of endoplasmic reticulum tubular network organization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000237724 RAB3GAP2-009 retained_intron Homo_sapiens 0 584
ENST00000358951 RAB3GAP2-001 protein_coding Homo_sapiens 0 4204
ENST00000474966 RAB3GAP2-006 processed_transcript Homo_sapiens 0 431
ENST00000478976 RAB3GAP2-008 processed_transcript Homo_sapiens 0 291
ENST00000484658 RAB3GAP2-011 protein_coding Homo_sapiens 0 514
ENST00000491005 RAB3GAP2-005 processed_transcript Homo_sapiens 0 455
ENST00000491305 RAB3GAP2-004 processed_transcript Homo_sapiens 0 455

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