C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane protein 150A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000069695 Tmem150a-001 ENSMUSG00000055912 10090 + 6:72355447-72359762 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000069695
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000069695 18.928±1.99 22.759±2.16 14.272±0.86 15.513±1.63 15.825±3.82 8.296±0.74 25.052±4.42 64.538±6.14 73.168±20.71 27.862±0.79 12.314±3.46 26.503±4.29 110.052±54.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WR CIL_0007WR_0002 VISTA 6:71915186-72518828
CIL_00084P CIL_00084P_0002 VISTA 6:71915200-72518764
CIL_0009AX CIL_0009AX_0002 VISTA 6:72353769-72955984
CIL_0005JP CIL_0005JP_0002 CGP 6:72355447-72362721

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005886 IEA plasma membrane
GO:0008150 ND biological_process
GO:0009056 IEA catabolic process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000306353 TMEM150A-002 protein_coding Homo_sapiens 0 1103
ENST00000334462 TMEM150A-001 protein_coding Homo_sapiens 0 1624
ENST00000409668 TMEM150A-005 protein_coding Homo_sapiens 0 1530
ENST00000422458 TMEM150A-011 nonsense_mediated_decay Homo_sapiens 0 647
ENST00000431593 TMEM150A-003 retained_intron Homo_sapiens 0 1101
ENST00000433956 TMEM150A-008 nonsense_mediated_decay Homo_sapiens 3e-17 94
ENST00000444380 TMEM150A-004 retained_intron Homo_sapiens 0 1254
ENST00000451147 TMEM150A-009 nonsense_mediated_decay Homo_sapiens 0 468
ENST00000463363 TMEM150A-012 retained_intron Homo_sapiens 0 627

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