C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA A430033K04 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000069862 A430033K04Rik-202 ENSMUSG00000056014 10090 + 5:138622859-138648903 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000069862
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000069862 0.873±0.54 1.198±0.35 1.301±0.15 5.912±3.59 1.603±0.14 1.360±0.13 0.615±0.14 0.820±0.47 1.410±0.97 1.458±0.08 0.671±0.11 3.399±0.41 1.301±0.17 0.140±0.05

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003676 IEA nucleic acid binding
GO:0005575 ND cellular_component
GO:0005622 IEA intracellular
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008150 ND biological_process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000302609 ZNF25-001 protein_coding Homo_sapiens 2.99878e-43 182
ENST00000359971 ZNF517-201 protein_coding Homo_sapiens 0.00000007 64
ENST00000374633 ZNF25-002 processed_transcript Homo_sapiens 2.99878e-43 182
ENST00000525105 ZNF517-004 protein_coding Homo_sapiens 0.00000004 64
ENST00000528012 ZNF517-009 protein_coding Homo_sapiens 0.00000001 64
ENST00000530879 ZNF517-003 retained_intron Homo_sapiens 0.0000001 64
ENST00000531720 ZNF517-001 protein_coding Homo_sapiens 0.00000005 64
ENST00000533965 ZNF517-011 nonsense_mediated_decay Homo_sapiens 0.00000008 64

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