C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DnaJ (Hsp40) homolog, subfamily A, member 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000070070 Dnaja4-001 ENSMUSG00000032285 10090 + 9:54699559-54716315 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryTestisENSMUST00000070070
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Testis
ENSMUST00000070070 2.668±0.00 8.099±1.15 1.957±0.00 2.305±0.29 2.912±0.44 3.273±0.00 2.352±0.19 4.895±0.24 4.812±1.47 10.383±1.20 16.520±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003TL CIL_0003TL_0002 CGP 9:54604877-54716315
CIL_0003TI CIL_0003TI_0002 CGP 9:54698873-54734519

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005829 IEA cytosol
GO:0009408 IEA response to heat
GO:0016020 IEA membrane
GO:0031072 IEA heat shock protein binding
GO:0042026 IEA protein refolding
GO:0046872 IEA metal ion binding
GO:0051082 IEA unfolded protein binding
GO:0051087 IEA chaperone binding
GO:0090084 IEA negative regulation of inclusion body assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000343789 DNAJA4-003 protein_coding Homo_sapiens 0 1860
ENST00000394852 DNAJA4-002 protein_coding Homo_sapiens 0 1910
ENST00000394855 DNAJA4-001 protein_coding Homo_sapiens 0 1864
ENST00000423642 DNAJA4-004 nonsense_mediated_decay Homo_sapiens 0 684
ENST00000440911 DNAJA4-012 nonsense_mediated_decay Homo_sapiens 0 1552
ENST00000446172 DNAJA4-006 protein_coding Homo_sapiens 0 1502
ENST00000483802 DNAJA4-011 nonsense_mediated_decay Homo_sapiens 0 920
ENST00000485075 DNAJA4-008 retained_intron Homo_sapiens 0 682
ENST00000489435 DNAJA4-005 protein_coding Homo_sapiens 0 252
ENST00000493321 DNAJA4-009 retained_intron Homo_sapiens 0 708
ENST00000542636 DNAJA4-007 nonsense_mediated_decay Homo_sapiens 0 769

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