C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: retinol saturase (all trans retinol 13,14 reductase)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000070597 Retsat-001 ENSMUSG00000056666 10090 + 6:72598475-72608425 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000070597
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000070597 15.951±4.37 13.102±4.09 4.183±0.18 6.233±7.85 12.191±2.28 9.935±2.67 6.031±0.56 31.340±4.43 22.175±17.41 3.787±1.28 4.499±0.72 7.861±1.99 4.417±1.69 2.285±0.30

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009AX CIL_0009AX_0002 VISTA 6:72353769-72955984

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005640 IDA nuclear outer membrane
GO:0005789 IDA endoplasmic reticulum membrane
GO:0016020 IEA membrane
GO:0016491 IDA oxidoreductase activity
GO:0031965 IDA nuclear membrane
GO:0042572 IDA retinol metabolic process
GO:0051786 IDA all-trans-retinol 13,14-reductase activity
GO:0055114 IDA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000295802 RETSAT-001 protein_coding Homo_sapiens 0 1648
ENST00000409984 RETSAT-007 protein_coding Homo_sapiens 0 586
ENST00000482694 RETSAT-006 processed_transcript Homo_sapiens 0 436

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