C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ankyrin repeat domain 33
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000070875 Ankrd33-201 ENSMUSG00000047034 10090 + 15:101115755-101120022 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastLungOvaryPlacentaENSMUST00000070875
Transcript ID Adipose Adrenal Bladder Brain Breast Lung Ovary Placenta
ENSMUST00000070875 0.017±0.00 0.034±0.02 0.020±0.00 0.035±0.02 0.037±0.00 0.064±0.01 0.048±0.02 0.095±0.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006JX CIL_0006JX_0002 CGP 15:101115755-101145336

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0003674 ND molecular_function
GO:0005634 IDA nucleus
GO:0005829 IDA cytosol
GO:0035914 IMP skeletal muscle cell differentiation
GO:2000678 IDA negative regulation of transcription regulatory region DNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000301190 ANKRD33-001 protein_coding Homo_sapiens 0 385
ENST00000340970 ANKRD33-005 protein_coding Homo_sapiens 0 579
ENST00000547119 ANKRD33-006 processed_transcript Homo_sapiens 0 385
ENST00000548383 ANKRD33-003 retained_intron Homo_sapiens 0 579
ENST00000548526 ANKRD33-004 retained_intron Homo_sapiens 0 390
ENST00000549751 ANKRD33-002 nonsense_mediated_decay Homo_sapiens 0 457
ENST00000550652 ANKRD33-008 retained_intron Homo_sapiens 0 350

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