C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ELMO/CED-12 domain containing 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000070990 Elmod3-003 ENSMUSG00000056698 10090 - 6:72565934-72598343 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000070990
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000070990 4.551±3.10 3.546±0.00 3.166±0.59 4.629±1.58 3.543±1.43 3.197±1.20 3.444±1.06 1.599±1.06 3.056±0.26 2.193±0.54 3.891±2.11 1.389±0.50 10.775±7.77

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009AX CIL_0009AX_0002 VISTA 6:72353769-72955984

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0005929 IEA cilium
GO:0006909 IEA phagocytosis
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000315658 ELMOD3-001 protein_coding Homo_sapiens 0 966
ENST00000393852 ELMOD3-004 protein_coding Homo_sapiens 0 1112
ENST00000409013 ELMOD3-003 protein_coding Homo_sapiens 0 1112
ENST00000409344 ELMOD3-011 protein_coding Homo_sapiens 0 1112
ENST00000409890 ELMOD3-201 protein_coding Homo_sapiens 0 1112
ENST00000410106 ELMOD3-007 nonsense_mediated_decay Homo_sapiens 0 701
ENST00000414593 ELMOD3-012 nonsense_mediated_decay Homo_sapiens 0 547
ENST00000423095 ELMOD3-005 nonsense_mediated_decay Homo_sapiens 0 401
ENST00000444108 ELMOD3-013 nonsense_mediated_decay Homo_sapiens 0 401
ENST00000446464 ELMOD3-009 nonsense_mediated_decay Homo_sapiens 0 255
ENST00000486908 ELMOD3-022 retained_intron Homo_sapiens 0 263
ENST00000490508 ELMOD3-008 processed_transcript Homo_sapiens 0 1090
ENST00000496957 ELMOD3-023 processed_transcript Homo_sapiens 0 545

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