C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: forkhead box B1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000071281 Foxb1-201 ENSMUSG00000059246 10090 - 9:69757710-69760940 protein_coding

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartLiverPlacentaENSMUST00000071281
Transcript ID Brain Heart Liver Placenta
ENSMUST00000071281 3.952±2.94 0.009±0.00 0.008±0.01 0.010±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007LQ CIL_0007LQ_0002 UCNEbase 9:69347863-69845139

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001655 IEP urogenital system development
GO:0001756 IMP somitogenesis
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007412 IMP axon target recognition
GO:0007595 IMP lactation
GO:0008542 IMP visual learning
GO:0021510 IEP spinal cord development
GO:0021767 IEP mammillary body development
GO:0021794 IEP thalamus development
GO:0021855 IMP hypothalamus cell migration
GO:0022029 IMP telencephalon cell migration
GO:0030901 IMP midbrain development
GO:0033504 IMP floor plate development
GO:0043524 IMP negative regulation of neuron apoptotic process
GO:0043565 IDA sequence-specific DNA binding
GO:0061030 IMP epithelial cell differentiation involved in mammary gland alveolus development
GO:0061374 IMP mammillothalamic axonal tract development
GO:0061377 IMP mammary gland lobule development
GO:0061379 IMP inferior colliculus development
GO:0061381 IMP cell migration in diencephalon

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000334793 FOXD2-001 protein_coding Homo_sapiens 0 235
ENST00000376708 FOXB2-001 protein_coding Homo_sapiens 0 431
ENST00000396057 FOXB1-001 protein_coding Homo_sapiens 0 1664
ENST00000560857 FOXB1-002 processed_transcript Homo_sapiens 0 252

Loading