C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: branched chain ketoacid dehydrogenase E1, alpha polypeptide
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000071329 Bckdha-201 ENSMUSG00000060376 10090 - 7:25629852-25658761 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000071329
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000071329 158.497±46.27 297.133±42.19 47.466±3.47 24.062±8.10 174.373±73.58 56.364±3.23 195.460±44.43 308.023±26.51 145.981±105.43 59.695±8.60 71.941±9.01 80.670±29.96 14.708±4.09 29.428±9.96

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008TR CIL_0008TR_0002 VISTA 7:25324415-25925712

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005739 IDA mitochondrion
GO:0007584 IEA response to nutrient
GO:0016624 IEA oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
GO:0032403 IEA protein complex binding
GO:0051384 IEA response to glucocorticoid
GO:0051591 IEA response to cAMP
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000269980 BCKDHA-001 protein_coding Homo_sapiens 0 1544
ENST00000457836 BCKDHA-002 protein_coding Homo_sapiens 0 1068
ENST00000535632 BCKDHA-008 processed_transcript Homo_sapiens 0 614
ENST00000538423 BCKDHA-005 retained_intron Homo_sapiens 0 499
ENST00000540732 CTC-435M10.3-001 protein_coding Homo_sapiens 0 1467
ENST00000541315 BCKDHA-004 protein_coding Homo_sapiens 0 363
ENST00000542943 BCKDHA-007 protein_coding Homo_sapiens 0 874
ENST00000545787 BCKDHA-009 retained_intron Homo_sapiens 0 571
ENST00000595085 BCKDHA-201 protein_coding Homo_sapiens 0 1037

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