C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: olfactory receptor 39
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000071725 Olfr39-001 ENSMUSG00000059623 10090 + 9:20282351-20286648 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENSMUST00000071725
Transcript ID Testis
ENSMUST00000071725 0.092±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002Q1 CIL_0002Q1_0003 CGP 9:20282351-20301190

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004930 IEA G-protein coupled receptor activity
GO:0004984 ISA olfactory receptor activity
GO:0005886 IEA plasma membrane
GO:0007186 ISA G-protein coupled receptor signaling pathway
GO:0007608 ISA sensory perception of smell
GO:0016021 ISA integral component of membrane
GO:0050911 IEA detection of chemical stimulus involved in sensory perception of smell

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000308682 OR7D4-001 protein_coding Homo_sapiens 0 627
ENST00000489105 OR7E100P-001 unprocessed_pseudogene Homo_sapiens 0 193
ENST00000505750 OR7E99P-001 unprocessed_pseudogene Homo_sapiens 3e-27 126
ENST00000526217 OR7E126P-001 unprocessed_pseudogene Homo_sapiens 9e-33 145
ENST00000592739 OR7D1P-001 unprocessed_pseudogene Homo_sapiens 0 603
ENST00000597719 OR7A11P-001 unprocessed_pseudogene Homo_sapiens 0 209
ENST00000601206 OR7A1P-001 unprocessed_pseudogene Homo_sapiens 0 268

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