C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nudix (nucleoside diphosphate linked moiety X)-type motif 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000071881 Nudt1-001 ENSMUSG00000036639 10090 + 5:140331860-140338137 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverLungOvaryPlacentaENSMUST00000071881
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Lung Ovary Placenta
ENSMUST00000071881 2.783±0.10 2.466±0.00 2.914±0.00 1.685±0.63 4.181±0.00 2.603±0.67 3.419±0.00 4.916±1.05 1.775±0.39 2.763±0.37 4.031±1.46

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000ZQ CIL_0000ZQ_0002 CGP 5:140008689-140331898
CIL_0000ZN CIL_0000ZN_0002 CGP 5:140327674-140338137
CIL_0000ZO CIL_0000ZO_0002 CGP 5:140331860-140389251

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 ISS nucleus
GO:0005737 ISS cytoplasm
GO:0005739 ISS mitochondrion
GO:0005759 ISS mitochondrial matrix
GO:0006184 ISS GTP catabolic process
GO:0006200 ISS ATP catabolic process
GO:0006203 IDA dGTP catabolic process
GO:0006281 IEA DNA repair
GO:0008413 IDA 8-oxo-7,8-dihydroguanosine triphosphate pyrophosphatase activity
GO:0016020 IEA membrane
GO:0030515 IDA snoRNA binding
GO:0031410 IEA cytoplasmic vesicle
GO:0035539 ISS 8-oxo-7,8-dihydrodeoxyguanosine triphosphate pyrophosphatase activity
GO:0042262 ISS DNA protection
GO:0046061 ISS dATP catabolic process
GO:0046872 IEA metal ion binding
GO:0047693 ISS ATP diphosphatase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000339737 NUDT1-005 protein_coding Homo_sapiens 0 387
ENST00000343985 NUDT1-004 protein_coding Homo_sapiens 0 390
ENST00000356714 NUDT1-001 protein_coding Homo_sapiens 0 387
ENST00000397046 NUDT1-002 protein_coding Homo_sapiens 0 387
ENST00000397048 NUDT1-003 protein_coding Homo_sapiens 0 390
ENST00000397049 NUDT1-201 protein_coding Homo_sapiens 0 387
ENST00000454650 NUDT1-006 protein_coding Homo_sapiens 7e-29 132
ENST00000471348 NUDT1-008 processed_transcript Homo_sapiens 9e-33 143

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