C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: myocyte enhancer factor 2A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000072460 Mef2a-001 ENSMUSG00000030557 10090 - 7:67234147-67372858 nonsense_mediated_decay

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001077 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0003677 IDA DNA binding
GO:0003682 IDA chromatin binding
GO:0003700 IDA sequence-specific DNA binding transcription factor activity
GO:0003705 IDA RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0005634 IC nucleus
GO:0006355 IDA regulation of transcription, DNA-templated
GO:0006366 IDA transcription from RNA polymerase II promoter
GO:0043565 IDA sequence-specific DNA binding
GO:0045893 IDA positive regulation of transcription, DNA-templated
GO:0045944 IGI positive regulation of transcription from RNA polymerase II promoter
GO:0046983 IEA protein dimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000338042 MEF2A-201 protein_coding Homo_sapiens 0 2521
ENST00000354410 MEF2A-001 protein_coding Homo_sapiens 0 2283
ENST00000449277 MEF2A-004 protein_coding Homo_sapiens 0 2521
ENST00000557785 MEF2A-002 protein_coding Homo_sapiens 0 2521
ENST00000557942 MEF2A-005 protein_coding Homo_sapiens 0 2422
ENST00000558049 MEF2A-010 protein_coding Homo_sapiens 3e-31 139
ENST00000558812 MEF2A-003 protein_coding Homo_sapiens 0 2218
ENST00000558856 MEF2A-011 processed_transcript Homo_sapiens 0 217
ENST00000558983 MEF2A-012 retained_intron Homo_sapiens 0 466
ENST00000559036 MEF2A-006 retained_intron Homo_sapiens 0 466
ENST00000559903 MEF2A-009 protein_coding Homo_sapiens 0 436
ENST00000560493 MEF2A-008 protein_coding Homo_sapiens 0 460
ENST00000561125 MEF2A-007 retained_intron Homo_sapiens 0 776

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