C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: integrator complex subunit 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000072607 Ints1-201 ENSMUSG00000029547 10090 - 5:139751282-139775678 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000072607
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000072607 7.350±1.66 13.866±2.43 3.054±1.44 13.014±2.35 9.292±4.60 9.060±0.82 5.060±0.67 5.670±0.90 3.660±1.20 8.928±1.99 3.843±1.27 11.234±3.79 8.100±3.78 5.757±0.93

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008V5 CIL_0008V5_0002 VISTA 5:139236245-139837428
CIL_0008DL CIL_0008DL_0002 VISTA 5:139238772-139840184
CIL_0000ZP CIL_0000ZP_0002 CGP 5:139706693-139775678
CIL_0002H7 CIL_0002H7_0003 CGP 5:139751282-139802653

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001832 IMP blastocyst growth
GO:0001833 IMP inner cell mass cell proliferation
GO:0003674 ND molecular_function
GO:0005634 IDA nucleus
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016180 IEA snRNA processing
GO:0032039 IEA integrator complex
GO:0034474 IMP U2 snRNA 3'-end processing
GO:0043066 IMP negative regulation of apoptotic process
GO:0043154 IMP negative regulation of cysteine-type endopeptidase activity involved in apoptotic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000404767 INTS1-001 protein_coding Homo_sapiens 0 6684
ENST00000468115 INTS1-003 retained_intron Homo_sapiens 0 1687
ENST00000482994 INTS1-006 retained_intron Homo_sapiens 0 448
ENST00000493531 INTS1-005 processed_transcript Homo_sapiens 0 545
ENST00000496988 INTS1-009 processed_transcript Homo_sapiens 0 313

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