C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: myomesin 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000073211 Myom1-202 ENSMUSG00000024049 10090 + 17:71019568-71126856 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBreastColonKidneyOvaryPlacentaENSMUST00000073211
Transcript ID Adrenal Bladder Breast Colon Kidney Ovary Placenta
ENSMUST00000073211 0.151±0.00 13.370±0.00 0.164±0.00 1.818±0.00 0.521±0.00 2.124±1.16 0.370±0.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006KY CIL_0006KY_0002 CGP 17:70993656-71126856
CIL_000157 CIL_000157_0002 CGP 17:71019521-71249817

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005200 TAS structural constituent of cytoskeleton
GO:0005856 TAS cytoskeleton
GO:0006936 IDA muscle contraction
GO:0030017 IDA sarcomere
GO:0031430 IDA M band
GO:0032982 IEA myosin filament
GO:0042802 IEA identical protein binding
GO:0042803 IDA protein homodimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000261606 MYOM1-003 protein_coding Homo_sapiens 0 2396
ENST00000356443 MYOM1-001 protein_coding Homo_sapiens 0 4580
ENST00000400569 MYOM1-201 protein_coding Homo_sapiens 0 2396
ENST00000581075 MYOM1-004 nonsense_mediated_decay Homo_sapiens 0 411
ENST00000581804 MYOM1-006 processed_transcript Homo_sapiens 0 364
ENST00000582016 MYOM1-005 processed_transcript Homo_sapiens 0 435

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