C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: vitamin K epoxide reductase complex, subunit 1-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000073945 Vkorc1l1-202 ENSMUSG00000066735 10090 + 5:129942113-129982891 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000073945
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000073945 5.981±0.77 5.467±0.35 3.054±0.00 6.568±0.00 3.955±0.91 4.442±2.14 1.725±0.00 2.954±1.12 4.476±1.87 3.458±1.54 2.009±0.00 3.228±1.34 7.262±1.94 3.048±0.60

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002HX CIL_0002HX_0002 CGP 5:129942109-130003049

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005789 ISS endoplasmic reticulum membrane
GO:0016021 IEA integral component of membrane
GO:0017187 ISS peptidyl-glutamic acid carboxylation
GO:0034599 ISS cellular response to oxidative stress
GO:0042373 IDA vitamin K metabolic process
GO:0047057 IDA vitamin-K-epoxide reductase (warfarin-sensitive) activity
GO:0048038 IEA quinone binding
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000360768 VKORC1L1-001 protein_coding Homo_sapiens 0 1463
ENST00000419314 CCT6P3-003 retained_intron Homo_sapiens 0 287
ENST00000426828 CCT6P3-004 processed_transcript Homo_sapiens 0 283
ENST00000429409 RP11-252P18.1-001 processed_pseudogene Homo_sapiens 0 204
ENST00000430369 RP11-460N20.3-001 unprocessed_pseudogene Homo_sapiens 0 281
ENST00000434382 VKORC1L1-002 protein_coding Homo_sapiens 0 880
ENST00000440057 CTD-2526L21.3-001 processed_pseudogene Homo_sapiens 0 206

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