C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: spermatogenesis and centriole associated 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000074173 Spatc1-201 ENSMUSG00000049653 10090 + 15:76268089-76292572 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000074173
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000074173 0.431±0.25 0.051±0.00 0.033±0.00 0.291±0.09 0.102±0.04 0.061±0.02 0.513±0.07 0.067±0.02 0.132±0.01 0.180±0.08 0.057±0.03 129.013±51.46

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007SS CIL_0007SS_0002 VISTA 15:76102685-76704351
CIL_0002GE CIL_0002GE_0002 CGP 15:76246807-76292572

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0005813 IDA centrosome
GO:0008150 ND biological_process
GO:0043015 IDA gamma-tubulin binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000377470 SPATC1-001 protein_coding Homo_sapiens 0 562
ENST00000447830 SPATC1-002 protein_coding Homo_sapiens 0 348
ENST00000530478 PARP10-024 protein_coding Homo_sapiens 0 243

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