C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: JAZF zinc finger 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000074541 Jazf1-001 ENSMUSG00000063568 10090 - 6:52768797-53068631 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000074541
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000074541 3.752±1.81 3.788±0.58 3.123±0.33 3.468±1.33 2.777±1.74 1.020±0.26 0.799±0.17 0.593±0.05 0.546±0.16 1.533±0.53 0.177±0.03 2.115±1.04 3.042±1.82 6.791±3.55

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00091R CIL_00091R_0002 VISTA 6:52667026-53269651
CIL_0003ZI CIL_0003ZI_0002 CGP 6:52713729-53068631
CIL_0003ZL CIL_0003ZL_0002 CGP 6:52768797-53696007

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 ISA negative regulation of transcription from RNA polymerase II promoter
GO:0003676 IEA nucleic acid binding
GO:0003714 ISA transcription corepressor activity
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0017053 ISA transcriptional repressor complex
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000079343 jazf1b-001 protein_coding Danio_rerio 0 571
ENSDART00000052646 jazf1a-001 protein_coding Danio_rerio 0 427
ENST00000283928 JAZF1-001 protein_coding Homo_sapiens 0 2468
ENST00000420835 JAZF1-003 protein_coding Homo_sapiens 0 329
ENST00000427814 JAZF1-008 protein_coding Homo_sapiens 0 2196
ENST00000430432 JAZF1-002 protein_coding Homo_sapiens 0 684
ENST00000447620 JAZF1-004 protein_coding Homo_sapiens 0 680
ENST00000452993 JAZF1-005 nonsense_mediated_decay Homo_sapiens 0 267
ENST00000454041 JAZF1-006 nonsense_mediated_decay Homo_sapiens 0 340
ENST00000460059 TAX1BP1-011 processed_transcript Homo_sapiens 0 418
ENST00000466516 JAZF1-007 processed_transcript Homo_sapiens 0 521
ENST00000488564 TAX1BP1-010 protein_coding Homo_sapiens 0 235

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