C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000075290 St8sia5-001 ENSMUSG00000025425 10090 + 18:77185979-77255320 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000075290
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000075290 0.077±0.00 0.206±0.15 0.013±0.00 2.487±0.00 0.953±0.14 1.069±0.00 0.094±0.06 0.089±0.05 0.019±0.01 5.507±0.84 0.171±0.13 0.567±0.45 0.638±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001P7 CIL_0001P7_0002 CGP 18:77185853-77442341

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003828 IDA alpha-N-acetylneuraminate alpha-2,8-sialyltransferase activity
GO:0006486 IEA protein glycosylation
GO:0030173 IEA integral component of Golgi membrane
GO:0097503 IEA sialylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000315087 ST8SIA5-001 protein_coding Homo_sapiens 0 1037
ENST00000536490 ST8SIA5-002 protein_coding Homo_sapiens 0 939
ENST00000538168 ST8SIA5-004 protein_coding Homo_sapiens 0 1315
ENST00000587428 ST8SIA5-008 retained_intron Homo_sapiens 0 514
ENST00000588155 ST8SIA5-003 retained_intron Homo_sapiens 0 459
ENST00000590497 ST8SIA5-005 processed_transcript Homo_sapiens 0 804
ENST00000591375 ST8SIA5-006 nonsense_mediated_decay Homo_sapiens 0 209

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