C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 2 interacting protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000075671 Nfatc2ip-001 ENSMUSG00000030722 10090 - 7:126382854-126396737 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000075671
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000075671 2.070±0.99 2.578±0.20 2.577±0.31 1.811±1.18 2.862±1.19 2.318±0.90 1.143±0.22 1.385±0.30 2.929±2.07 2.943±0.76 1.124±0.32 3.925±2.01 1.066±0.55 16.691±6.89

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005AT CIL_0005AT_0002 CGP 7:126370060-126396737

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001816 IDA cytokine production
GO:0005634 IC nucleus
GO:0005737 IEA cytoplasm
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000320805 NFATC2IP-001 protein_coding Homo_sapiens 0 780
ENST00000564978 NFATC2IP-003 protein_coding Homo_sapiens 0 472
ENST00000568148 NFATC2IP-004 protein_coding Homo_sapiens 0 468

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