C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Williams-Beuren syndrome chromosome region 16 homolog (human)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000076228 Wbscr16-001 ENSMUSG00000061979 10090 - 5:134148054-134176774 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000076228
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000076228 5.059±0.36 10.709±0.53 7.277±1.82 5.898±0.75 4.822±1.54 7.336±1.03 6.762±0.54 9.316±0.63 7.187±1.59 5.403±0.64 10.107±0.67 8.664±2.10 6.710±3.15 3.188±1.72

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00052L CIL_00052L_0003 CGP 5:134099711-134176774
CIL_00051K CIL_00051K_0002 CGP 5:134148054-134224355

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005087 NAS Ran guanyl-nucleotide exchange factor activity
GO:0005739 IDA mitochondrion
GO:0008150 ND biological_process
GO:0032853 NAS positive regulation of Ran GTPase activity
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000610322 WBSCR16-001 protein_coding Homo_sapiens 0 1351
ENST00000614461 WBSCR16-201 protein_coding Homo_sapiens 0 1254
ENST00000616051 WBSCR16-003 retained_intron Homo_sapiens 0 1149
ENST00000618102 WBSCR16-002 retained_intron Homo_sapiens 0 811

Loading