C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ADP-ribosylation factor-like 16
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000076921 Arl16-001 ENSMUSG00000057594 10090 - 11:120465438-120467600 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000076921
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000076921 3.546±0.16 5.831±3.44 4.981±0.55 5.118±1.79 5.558±0.66 2.439±0.19 3.873±0.34 2.686±0.46 3.438±0.33 0.632±0.16 5.090±1.40 4.273±0.50 3.757±0.81

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002FQ CIL_0002FQ_0002 CGP 11:120458115-120467607
CIL_0003BA CIL_0003BA_0002 CGP 11:120464866-120483984

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005525 IEA GTP binding
GO:0005575 ND cellular_component
GO:0005622 IEA intracellular
GO:0007264 IEA small GTPase mediated signal transduction
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000397498 ARL16-001 protein_coding Homo_sapiens 0 532
ENST00000570561 ARL16-008 protein_coding Homo_sapiens 0 475
ENST00000570910 ARL16-002 retained_intron Homo_sapiens 0 276
ENST00000571082 ARL16-003 retained_intron Homo_sapiens 0 276
ENST00000572704 ARL16-013 retained_intron Homo_sapiens 0 204
ENST00000572937 ARL16-011 retained_intron Homo_sapiens 7e-32 141
ENST00000573392 ARL16-010 protein_coding Homo_sapiens 0 276
ENST00000573569 ARL16-012 retained_intron Homo_sapiens 0 475
ENST00000573715 ARL16-005 protein_coding Homo_sapiens 0 276
ENST00000574938 ARL16-007 protein_coding Homo_sapiens 0 276
ENST00000576135 ARL16-009 protein_coding Homo_sapiens 0 412
ENST00000576914 ARL16-006 nonsense_mediated_decay Homo_sapiens 0 248
ENST00000577142 ARL16-004 retained_intron Homo_sapiens 0 276
ENST00000621051 ARL16-201 protein_coding Homo_sapiens 0 532
ENST00000622299 ARL16-014 protein_coding Homo_sapiens 0 532
ENST00000622820 RP11-231P20.6-001 unprocessed_pseudogene Homo_sapiens 0 355

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