C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 1661
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000077500 Gm1661-001 ENSMUSG00000060268 10090 - 4:117215193-117251917 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryPlacentaENSMUST00000077500
Transcript ID Ovary Placenta
ENSMUST00000077500 0.939±0.00 0.078±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00093U CIL_00093U_0002 VISTA 4:117090982-117692314

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000357508 C1orf228-005 retained_intron Homo_sapiens 0 846
ENST00000418644 C1orf228-016 protein_coding Homo_sapiens 0 357
ENST00000421398 C1orf228-004 processed_transcript Homo_sapiens 0 418
ENST00000424484 C1orf228-003 retained_intron Homo_sapiens 2e-39 167
ENST00000434068 C1orf228-002 protein_coding Homo_sapiens 0 418
ENST00000441519 C1orf228-015 protein_coding Homo_sapiens 0 671
ENST00000444751 C1orf228-001 processed_transcript Homo_sapiens 0 418
ENST00000445071 C1orf228-017 protein_coding Homo_sapiens 0 647
ENST00000453711 C1orf228-012 protein_coding Homo_sapiens 0 206
ENST00000455805 C1orf228-014 nonsense_mediated_decay Homo_sapiens 0 429
ENST00000458657 C1orf228-013 protein_coding Homo_sapiens 0 867
ENST00000535358 C1orf228-201 protein_coding Homo_sapiens 0 846

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