C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: immunoglobulin superfamily, DCC subclass, member 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000077696 Igdcc4-202 ENSMUSG00000032816 10090 + 9:65101486-65137940 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderLiverOvaryTestisENSMUST00000077696
Transcript ID Adipose Bladder Liver Ovary Testis
ENSMUST00000077696 1.948±0.00 1.285±0.00 0.535±0.00 2.114±0.33 0.106±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RY CIL_0007RY_0002 VISTA 9:65081642-65684657

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005887 ISA integral component of plasma membrane
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000352385 IGDCC4-001 protein_coding Homo_sapiens 0 3031
ENST00000558048 IGDCC4-003 processed_transcript Homo_sapiens 0 817
ENST00000559327 IGDCC4-002 retained_intron Homo_sapiens 0 2859
ENST00000560319 IGDCC4-006 retained_intron Homo_sapiens 0 342
ENST00000561309 IGDCC4-004 retained_intron Homo_sapiens 0 339

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