C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: vacuolar protein sorting 13C (yeast)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000077879 Vps13c-201 ENSMUSG00000035284 10090 + 9:67840396-67995634 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000077879
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000077879 3.484±2.43 1.743±0.54 1.378±0.53 2.629±1.17 2.293±0.98 1.570±0.50 1.355±0.47 1.795±0.69 2.926±0.92 2.943±1.04 2.059±0.00 0.742±0.35

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008150 ND biological_process
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000249837 VPS13C-001 protein_coding Homo_sapiens 0 10360
ENST00000261517 VPS13C-002 protein_coding Homo_sapiens 0 11080
ENST00000395896 VPS13C-003 protein_coding Homo_sapiens 0 10790
ENST00000395898 VPS13C-004 protein_coding Homo_sapiens 0 10060
ENST00000558088 VPS13C-008 processed_transcript Homo_sapiens 0 375
ENST00000558338 VPS13C-006 retained_intron Homo_sapiens 0 1216
ENST00000558919 VPS13C-010 processed_transcript Homo_sapiens 0 499
ENST00000561258 VPS13C-007 retained_intron Homo_sapiens 0 499

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