C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: dynein light chain roadblock-type 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000078170 Dynlrb2-201 ENSMUSG00000034467 10090 + 8:116505015-116515896 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000078170
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000078170 0.382±0.01 0.217±0.00 0.076±0.06 2.080±1.10 0.205±0.07 0.208±0.01 2.588±0.17 1.098±0.33 0.072±0.05 38.995±4.92 0.146±0.04 24.839±9.71 0.146±0.00 77.097±24.41

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003Z4 CIL_0003Z4_0002 CGP 8:115682942-116515896
CIL_0008MS CIL_0008MS_0002 VISTA 8:116035144-116637629
CIL_0008HN CIL_0008HN_0002 VISTA 8:116084137-116685431
CIL_0001Q8 CIL_0001Q8_0002 CGP 8:116505015-116732991

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003774 IEA motor activity
GO:0005515 IPI protein binding
GO:0005868 IDA cytoplasmic dynein complex
GO:0005874 IEA microtubule
GO:0006810 IEA transport
GO:0008150 ND biological_process
GO:0008152 IEA metabolic process
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000305904 DYNLRB2-001 protein_coding Homo_sapiens 0 368
ENST00000338542 DYNLRB2-002 nonsense_mediated_decay Homo_sapiens 0 281
ENST00000561880 DYNLRB2-003 nonsense_mediated_decay Homo_sapiens 0 279
ENST00000562982 DYNLRB2-004 protein_coding Homo_sapiens 0 359
ENST00000570222 DYNLRB2-005 processed_transcript Homo_sapiens 0 278

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