C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: leucine rich repeat containing 51
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000078448 Lrrc51-001 ENSMUSG00000064307 10090 - 7:101912990-101933806 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonKidneyLiverLungOvaryENSMUST00000078448
Transcript ID Adipose Adrenal Breast Colon Kidney Liver Lung Ovary
ENSMUST00000078448 4.926±0.00 1.339±0.48 1.935±0.03 2.408±0.58 1.530±0.00 0.729±0.00 3.532±0.68 4.177±1.53

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008XL CIL_0008XL_0002 VISTA 7:101413526-102014552
CIL_000303 CIL_000303_0002 CGP 7:101905837-101933895
CIL_000302 CIL_000302_0002 CGP 7:101912984-102014959

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000289488 LRTOMT-001 protein_coding Homo_sapiens 0 859
ENST00000324866 LRTOMT-006 protein_coding Homo_sapiens 0 220
ENST00000423494 LRTOMT-003 protein_coding Homo_sapiens 0 645
ENST00000447974 LRTOMT-204 protein_coding Homo_sapiens 0 797
ENST00000535883 LRTOMT-009 nonsense_mediated_decay Homo_sapiens 0 597
ENST00000538478 LRTOMT-014 protein_coding Homo_sapiens 0 835
ENST00000539271 LRTOMT-012 protein_coding Homo_sapiens 0 571
ENST00000539587 LRTOMT-004 protein_coding Homo_sapiens 0 401
ENST00000615940 LRTOMT-205 protein_coding Homo_sapiens 0 645

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