C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: galactose-3-O-sulfotransferase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000078757 Gal3st1-001 ENSMUSG00000049721 10090 + 11:3983636-3999326 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000078757
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000078757 0.270±0.18 0.081±0.00 0.505±0.05 0.192±0.02 0.259±0.06 8.239±1.27 0.165±0.00 3.526±0.17 0.353±0.19 1.445±0.02 0.387±0.14 0.594±0.24 0.072±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006F8 CIL_0006F8_0002 CGP 11:3963975-3999326

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0001733 IDA galactosylceramide sulfotransferase activity
GO:0006682 IDA galactosylceramide biosynthetic process
GO:0007283 IMP spermatogenesis
GO:0009247 TAS glycolipid biosynthetic process
GO:0016021 ISS integral component of membrane
GO:0042552 IMP myelination

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000338911 GAL3ST1-201 protein_coding Homo_sapiens 0 1192
ENST00000401975 GAL3ST1-001 protein_coding Homo_sapiens 0 1192
ENST00000402321 GAL3ST1-003 protein_coding Homo_sapiens 0 1192
ENST00000402369 GAL3ST1-004 protein_coding Homo_sapiens 0 1243
ENST00000406361 GAL3ST1-002 protein_coding Homo_sapiens 0 1192
ENST00000406955 GAL3ST1-005 protein_coding Homo_sapiens 0 1192
ENST00000416358 GAL3ST1-012 protein_coding Homo_sapiens 0 403
ENST00000423299 GAL3ST1-016 protein_coding Homo_sapiens 0 372
ENST00000423371 GAL3ST1-011 protein_coding Homo_sapiens 0 233
ENST00000427899 GAL3ST1-018 protein_coding Homo_sapiens 0 377
ENST00000428682 GAL3ST1-009 protein_coding Homo_sapiens 0 222
ENST00000431313 GAL3ST1-007 protein_coding Homo_sapiens 0 693
ENST00000437282 GAL3ST1-020 protein_coding Homo_sapiens 0 496
ENST00000441967 GAL3ST1-023 protein_coding Homo_sapiens 0 758
ENST00000443136 GAL3ST1-015 protein_coding Homo_sapiens 0 359
ENST00000452827 GAL3ST1-017 protein_coding Homo_sapiens 0 640
ENST00000453479 GAL3ST1-021 protein_coding Homo_sapiens 0 213

Loading