C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tudor domain containing 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000079009 Tdrd9-201 ENSMUSG00000054003 10090 + 12:111971559-112068854 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000079009
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000079009 0.014±0.01 0.027±0.01 0.027±0.00 0.187±0.00 0.014±0.01 0.030±0.02 0.050±0.01 0.034±0.01 0.020±0.01 0.052±0.02 0.035±0.02 0.262±0.11 0.070±0.06 22.891±7.79

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006X8 CIL_0006X8_0002 CGP 12:111961376-112068854
CIL_0006X7 CIL_0006X7_0002 CGP 12:111971559-112068854

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0004386 IEA helicase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005634 IDA nucleus
GO:0007140 IMP male meiosis
GO:0007275 IEA multicellular organismal development
GO:0007283 IMP spermatogenesis
GO:0009566 IMP fertilization
GO:0030154 IEA cell differentiation
GO:0031047 IEA gene silencing by RNA
GO:0034587 IMP piRNA metabolic process
GO:0043046 IMP DNA methylation involved in gamete generation
GO:0071547 IDA piP-body

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000339063 TDRD9-201 protein_coding Homo_sapiens 0 2985
ENST00000409874 TDRD9-001 protein_coding Homo_sapiens 0 3679
ENST00000496087 TDRD9-004 processed_transcript Homo_sapiens 0 309
ENST00000554571 TDRD9-008 processed_transcript Homo_sapiens 0 525
ENST00000557332 TDRD9-007 protein_coding Homo_sapiens 0 2388

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