C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: numb-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000079258 Numbl-001 ENSMUSG00000063160 10090 + 7:27258725-27282141 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000079258
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000079258 13.881±3.60 11.283±3.08 19.500±0.05 30.317±4.14 12.367±3.69 7.861±0.59 1.754±0.40 2.864±0.43 1.864±0.25 7.725±1.93 0.751±0.00 17.836±5.01 3.790±1.33 2.631±1.14

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IDA cytoplasm
GO:0007399 IMP nervous system development
GO:0007405 IGI neuroblast proliferation
GO:0007409 IMP axonogenesis
GO:0019221 ISS cytokine-mediated signaling pathway
GO:0019538 ISS protein metabolic process
GO:0021670 IMP lateral ventricle development
GO:0021849 IMP neuroblast division in subventricular zone
GO:0030900 IMP forebrain development
GO:0034332 IGI adherens junction organization
GO:0050769 IMP positive regulation of neurogenesis
GO:0050775 IEA positive regulation of dendrite morphogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000017329 numb-002 protein_coding Danio_rerio 0 337
ENSDART00000103350 numb-001 protein_coding Danio_rerio 0 231
ENST00000252891 NUMBL-001 protein_coding Homo_sapiens 0 2645
ENST00000540131 NUMBL-003 protein_coding Homo_sapiens 0 2139
ENST00000593367 NUMBL-005 retained_intron Homo_sapiens 0 673
ENST00000595741 NUMBL-009 protein_coding Homo_sapiens 0 597
ENST00000598773 NUMBL-008 protein_coding Homo_sapiens 0 1014
ENST00000598779 NUMBL-002 protein_coding Homo_sapiens 0 2294
ENST00000599594 NUMBL-011 processed_transcript Homo_sapiens 0 472
ENST00000599786 NUMBL-006 retained_intron Homo_sapiens 0 486
ENST00000600636 NUMBL-007 protein_coding Homo_sapiens 0 568
ENST00000600967 NUMBL-010 protein_coding Homo_sapiens 0 806

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