C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000079618 St8sia5-002 ENSMUSG00000025425 10090 + 18:77185853-77255450 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENSMUST00000079618
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENSMUST00000079618 0.056±0.01 1.093±0.76 0.008±0.00 0.884±0.13 0.527±0.45 8.894±1.15 0.246±0.07 0.041±0.00 0.077±0.04 6.805±0.80 0.575±0.32 1.055±0.51 0.433±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001P7 CIL_0001P7_0002 CGP 18:77185853-77442341

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003828 IDA alpha-N-acetylneuraminate alpha-2,8-sialyltransferase activity
GO:0006486 IEA protein glycosylation
GO:0030173 IEA integral component of Golgi membrane
GO:0097503 IEA sialylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000315087 ST8SIA5-001 protein_coding Homo_sapiens 0 1232
ENST00000536490 ST8SIA5-002 protein_coding Homo_sapiens 0 939
ENST00000538168 ST8SIA5-004 protein_coding Homo_sapiens 0 1037
ENST00000587428 ST8SIA5-008 retained_intron Homo_sapiens 0 514
ENST00000588155 ST8SIA5-003 retained_intron Homo_sapiens 0 200
ENST00000590497 ST8SIA5-005 processed_transcript Homo_sapiens 0 804
ENST00000591375 ST8SIA5-006 nonsense_mediated_decay Homo_sapiens 0 209

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