C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: HCLS1 associated X-1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000079724 Hax1-201 ENSMUSG00000027944 10090 - 3:89995457-89998686 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000079724
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000079724 24.222±2.67 24.068±3.18 34.065±6.39 35.087±10.45 17.641±6.02 10.431±2.08 13.534±0.89 46.127±2.25 39.083±15.45 16.468±2.07 17.801±2.92 22.961±21.02 46.325±14.30 42.928±6.74

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005667 IEA transcription factor complex
GO:0005737 IDA cytoplasm
GO:0005739 IDA mitochondrion
GO:0005783 IDA endoplasmic reticulum
GO:0007166 TAS cell surface receptor signaling pathway
GO:0014068 IEA positive regulation of phosphatidylinositol 3-kinase signaling
GO:0015629 IDA actin cytoskeleton
GO:0016020 IEA membrane
GO:0016324 IEA apical plasma membrane
GO:0016529 IEA sarcoplasmic reticulum
GO:0019904 IEA protein domain specific binding
GO:0019966 IEA interleukin-1 binding
GO:0030027 IDA lamellipodium
GO:0030136 IEA clathrin-coated vesicle
GO:0030833 IEA regulation of actin filament polymerization
GO:0030854 IEA positive regulation of granulocyte differentiation
GO:0031410 IEA cytoplasmic vesicle
GO:0033138 IEA positive regulation of peptidyl-serine phosphorylation
GO:0043231 IEA intracellular membrane-bounded organelle
GO:0045944 IEA positive regulation of transcription from RNA polymerase II promoter
GO:0047485 IEA protein N-terminus binding
GO:0050731 IEA positive regulation of peptidyl-tyrosine phosphorylation
GO:0051897 IEA positive regulation of protein kinase B signaling
GO:0071345 IEA cellular response to cytokine stimulus
GO:2000251 IEA positive regulation of actin cytoskeleton reorganization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000328703 HAX1-001 protein_coding Homo_sapiens 0 865
ENST00000411473 U40455.1-001 processed_pseudogene Homo_sapiens 0 638
ENST00000435087 HAX1-006 protein_coding Homo_sapiens 9.99967e-42 174
ENST00000447768 HAX1-012 nonsense_mediated_decay Homo_sapiens 9.99967e-42 174
ENST00000457918 HAX1-004 protein_coding Homo_sapiens 0 706
ENST00000471326 HAX1-002 retained_intron Homo_sapiens 0 649
ENST00000477780 HAX1-009 retained_intron Homo_sapiens 0 270
ENST00000483970 HAX1-005 protein_coding Homo_sapiens 0 765
ENST00000531435 HAX1-003 retained_intron Homo_sapiens 0 270
ENST00000532105 HAX1-013 protein_coding Homo_sapiens 3e-17 94

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