C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: coronin 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000079770 Coro6-004 ENSMUSG00000020836 10090 + 11:77463911-77469501 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonKidneyLiverLungOvaryTestisENSMUST00000079770
Transcript ID Adrenal Breast Colon Kidney Liver Lung Ovary Testis
ENSMUST00000079770 2.103±0.00 6.644±5.08 0.665±0.01 0.926±0.19 0.067±0.02 5.976±0.00 2.657±1.30 0.287±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000873 CIL_000873_0002 VISTA 11:77122469-77724441
CIL_0009BZ CIL_0009BZ_0002 VISTA 11:77122483-77724456

Gene Ontology

GO IDEvidence TypeGO Description
GO:0015629 IBA actin cytoskeleton
GO:0030036 IBA actin cytoskeleton organization
GO:0051015 IBA actin filament binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000345068 CORO6-001 protein_coding Homo_sapiens 0 870
ENST00000388767 CORO6-201 protein_coding Homo_sapiens 0 870
ENST00000459686 CORO6-004 retained_intron Homo_sapiens 0 870
ENST00000467534 CORO6-005 retained_intron Homo_sapiens 0 728
ENST00000469090 CORO6-006 retained_intron Homo_sapiens 0 728
ENST00000480954 CORO6-002 nonsense_mediated_decay Homo_sapiens 0 728
ENST00000492276 CORO6-003 protein_coding Homo_sapiens 0 835
ENST00000580212 CORO6-008 protein_coding Homo_sapiens 0 1581
ENST00000584602 CORO6-011 protein_coding Homo_sapiens 0 473
ENST00000584969 CORO6-009 protein_coding Homo_sapiens 0 870

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