C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: secretory carrier membrane protein 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000079883 Scamp4-201 ENSMUSG00000078441 10090 + 10:80602882-80615783 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000079883
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000079883 38.551±2.36 72.875±8.77 19.993±2.20 18.289±8.17 41.721±14.76 61.035±11.15 17.728±2.56 35.050±1.66 20.494±4.84 43.907±2.38 9.453±1.03 36.523±15.57 26.814±12.59 15.894±7.15

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008150 ND biological_process
GO:0015031 IEA protein transport
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000316097 SCAMP4-001 protein_coding Homo_sapiens 0 634
ENST00000409472 SCAMP4-003 protein_coding Homo_sapiens 0 294
ENST00000411971 SCAMP4-008 protein_coding Homo_sapiens 0 388
ENST00000414057 SCAMP4-011 protein_coding Homo_sapiens 0 617
ENST00000452128 SCAMP4-010 retained_intron Homo_sapiens 0 429
ENST00000460767 SCAMP4-006 nonsense_mediated_decay Homo_sapiens 0 374
ENST00000489554 SCAMP4-007 processed_transcript Homo_sapiens 0 425
ENST00000588907 SCAMP4-013 protein_coding Homo_sapiens 0 213
ENST00000590266 SCAMP4-009 protein_coding Homo_sapiens 0 195
ENST00000621748 SCAMP4-012 protein_coding Homo_sapiens 0 627

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