C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ADP-ribosylation factor GTPase activating protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000080008 Arfgap2-001 ENSMUSG00000027255 10090 + 2:91264974-91276931 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainColonHeartKidneyLiverOvaryPlacentaTestisENSMUST00000080008
Transcript ID Adipose Bladder Brain Colon Heart Kidney Liver Ovary Placenta Testis
ENSMUST00000080008 4.031±0.00 6.135±0.50 6.717±0.84 3.022±0.00 2.644±0.48 3.593±0.00 5.163±1.23 16.901±6.60 8.054±2.52 4.851±0.81

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0008060 IEA ARF GTPase activator activity
GO:0008270 IEA zinc ion binding
GO:0015031 IEA protein transport
GO:0016192 IEA vesicle-mediated transport
GO:0032312 IEA regulation of ARF GTPase activity
GO:0043547 IEA positive regulation of GTPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000378618 C11orf49-003 protein_coding Homo_sapiens 0.000000000000007 86
ENST00000395449 ARFGAP2-006 processed_transcript Homo_sapiens 0 1400
ENST00000426335 ARFGAP2-201 protein_coding Homo_sapiens 0 1463
ENST00000524586 ARFGAP2-020 nonsense_mediated_decay Homo_sapiens 0 377
ENST00000524727 ARFGAP2-005 retained_intron Homo_sapiens 0 599
ENST00000524782 ARFGAP2-001 protein_coding Homo_sapiens 0 2150
ENST00000525314 ARFGAP2-015 protein_coding Homo_sapiens 0 760
ENST00000525398 ARFGAP2-023 protein_coding Homo_sapiens 0 619
ENST00000526185 ARFGAP2-003 retained_intron Homo_sapiens 0 377
ENST00000526948 ARFGAP2-025 retained_intron Homo_sapiens 0 250
ENST00000527097 ARFGAP2-022 retained_intron Homo_sapiens 0 824
ENST00000527776 ARFGAP2-027 protein_coding Homo_sapiens 0 736
ENST00000527927 ARFGAP2-017 protein_coding Homo_sapiens 0 708
ENST00000528041 ARFGAP2-012 nonsense_mediated_decay Homo_sapiens 0 279
ENST00000528072 ARFGAP2-008 retained_intron Homo_sapiens 0 283
ENST00000528444 ARFGAP2-002 protein_coding Homo_sapiens 0 614
ENST00000528708 ARFGAP2-010 nonsense_mediated_decay Homo_sapiens 0 484
ENST00000529439 ARFGAP2-009 nonsense_mediated_decay Homo_sapiens 0 416
ENST00000529455 ARFGAP2-019 nonsense_mediated_decay Homo_sapiens 0 592
ENST00000529599 ARFGAP2-013 processed_transcript Homo_sapiens 0 636
ENST00000530794 ARFGAP2-011 retained_intron Homo_sapiens 0 555
ENST00000531750 ARFGAP2-018 processed_transcript Homo_sapiens 0 638
ENST00000532438 ARFGAP2-014 nonsense_mediated_decay Homo_sapiens 0 601
ENST00000532478 ARFGAP2-016 nonsense_mediated_decay Homo_sapiens 0 778
ENST00000533243 ARFGAP2-007 nonsense_mediated_decay Homo_sapiens 0 1208
ENST00000533939 ARFGAP2-024 processed_transcript Homo_sapiens 0 579

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