C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: D site albumin promoter binding protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000080885 Dbp-001 ENSMUSG00000059824 10090 + 7:45705088-45710155 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLungMuscleOvaryENSMUST00000080885
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Lung Muscle Ovary
ENSMUST00000080885 21.738±0.27 213.509±27.03 113.825±9.11 35.947±0.00 39.293±1.25 23.680±0.90 35.429±5.59 47.261±4.66 33.787±12.48 39.610±9.50

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000977 IEA RNA polymerase II regulatory region sequence-specific DNA binding
GO:0001077 IEA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0001889 IEA liver development
GO:0005634 IEA nucleus
GO:0005654 TAS nucleoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 TAS regulation of transcription, DNA-templated
GO:0007623 TAS circadian rhythm
GO:0045944 IEA positive regulation of transcription from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000222122 DBP-001 protein_coding Homo_sapiens 0 1476
ENST00000594723 DBP-003 retained_intron Homo_sapiens 0 686
ENST00000597434 SPHK2-008 non_stop_decay Homo_sapiens 3e-35 154
ENST00000599029 SPHK2-010 protein_coding Homo_sapiens 5e-35 154
ENST00000601104 DBP-002 protein_coding Homo_sapiens 0 987

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