C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nuclear autoantigenic sperm protein (histone-binding)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000081182 Nasp-003 ENSMUSG00000028693 10090 - 4:116601609-116627478 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverOvaryPlacentaENSMUST00000081182
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Ovary Placenta
ENSMUST00000081182 0.770±0.30 1.333±0.04 5.713±0.00 0.494±0.08 1.470±0.73 0.792±0.14 1.391±0.28 7.895±8.24 11.238±13.71 37.091±44.93

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001PU CIL_0001PU_0002 CGP 4:116596654-116627941
CIL_0001PT CIL_0001PT_0002 CGP 4:116601052-116651680

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001824 IMP blastocyst development
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IEA cytoplasm
GO:0006260 IDA DNA replication
GO:0007049 IDA cell cycle
GO:0008283 IDA cell proliferation
GO:0015031 IEA protein transport
GO:0042393 IDA histone binding
GO:0043486 IDA histone exchange
GO:0051879 IDA Hsp90 protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000350030 NASP-001 protein_coding Homo_sapiens 0 1260
ENST00000351223 NASP-005 protein_coding Homo_sapiens 0 1417
ENST00000372052 NASP-004 protein_coding Homo_sapiens 0 1783
ENST00000437362 NASP-006 nonsense_mediated_decay Homo_sapiens 0 560
ENST00000437901 NASP-007 protein_coding Homo_sapiens 0 560
ENST00000453748 NASP-002 nonsense_mediated_decay Homo_sapiens 5.99756e-43 180
ENST00000464190 NASP-008 retained_intron Homo_sapiens 0 366
ENST00000470768 NASP-009 protein_coding Homo_sapiens 1e-37 161
ENST00000472408 NASP-010 retained_intron Homo_sapiens 0 399
ENST00000481782 NASP-003 retained_intron Homo_sapiens 0 1256
ENST00000525515 NASP-015 protein_coding Homo_sapiens 0 270
ENST00000527470 NASP-018 protein_coding Homo_sapiens 5e-38 161
ENST00000528084 NASP-012 nonsense_mediated_decay Homo_sapiens 9.80909e-45 183
ENST00000528238 NASP-016 protein_coding Homo_sapiens 0 830
ENST00000529239 AC022182.2-001 processed_pseudogene Homo_sapiens 0 990
ENST00000529333 NASP-023 nonsense_mediated_decay Homo_sapiens 2.00386e-43 180
ENST00000530073 NASP-011 processed_transcript Homo_sapiens 0 1256
ENST00000530840 NASP-014 nonsense_mediated_decay Homo_sapiens 5e-23 111
ENST00000531532 NASP-013 nonsense_mediated_decay Homo_sapiens 2.00386e-43 180
ENST00000531612 NASP-020 protein_coding Homo_sapiens 0 353
ENST00000534101 NASP-022 processed_transcript Homo_sapiens 0 444
ENST00000534450 NASP-019 protein_coding Homo_sapiens 0 529
ENST00000537798 NASP-201 protein_coding Homo_sapiens 0 1260

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