C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lysosomal-associated membrane protein 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000081880 Lamp3-201 ENSMUSG00000041247 10090 - 16:19653381-19706365 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastHeartKidneyLiverLungMusclePlacentaTestisENSMUST00000081880
Transcript ID Brain Breast Heart Kidney Liver Lung Muscle Placenta Testis
ENSMUST00000081880 0.010±0.01 0.122±0.07 0.130±0.00 0.017±0.01 0.003±0.00 89.252±5.87 0.017±0.01 0.008±0.00 0.062±0.03

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002376 IEA immune system process
GO:0003674 ND molecular_function
GO:0005764 IDA lysosome
GO:0005765 IDA lysosomal membrane
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane
GO:0097233 IDA alveolar lamellar body membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000307720 PPID-001 protein_coding Homo_sapiens 0 728
ENST00000507213 PPID-004 protein_coding Homo_sapiens 8e-28 128
ENST00000512699 PPID-003 nonsense_mediated_decay Homo_sapiens 0 468

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