C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mitochondrially encoded NADH dehydrogenase 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000082418 mt-Nd5-201 ENSMUSG00000064367 10090 + MT:11742-13565 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLiverLungOvaryPlacentaTestisENSMUST00000082418
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000082418 883.935±9.81 524.809±93.44 648.983±0.00 767.042±2.97 227.660±36.56 2145.970±0.00 1327.240±176.91 387.992±127.49 227.076±111.60 424.354±94.98 209.965±54.65

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001WV CIL_0001WV_0003 CGP MT:10167-13565
CIL_00077P CIL_00077P_0003 CGP MT:11742-14070

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003954 IDA NADH dehydrogenase activity
GO:0005739 IDA mitochondrion
GO:0005743 IEA mitochondrial inner membrane
GO:0008137 IEA NADH dehydrogenase (ubiquinone) activity
GO:0016021 IEA integral component of membrane
GO:0042773 IEA ATP synthesis coupled electron transport
GO:0055114 IEA oxidation-reduction process
GO:0070469 IEA respiratory chain

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000430812 MTND5P23-001 unprocessed_pseudogene Homo_sapiens 0 274
ENST00000458676 MTND5P29-001 unprocessed_pseudogene Homo_sapiens 0 276
ENST00000502851 MTND5P12-001 processed_pseudogene Homo_sapiens 0 427
ENST00000603719 MTND5P10-001 processed_pseudogene Homo_sapiens 0 459

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