C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: selenophosphate synthetase 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000082428 Sephs2-201 ENSMUSG00000049091 10090 - 7:127272561-127273919 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000082428
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000082428 12.935±8.31 55.073±14.43 4.940±0.82 6.882±1.30 20.521±8.51 22.259±2.06 6.833±3.12 40.975±24.68 49.504±29.17 9.815±3.88 3.282±0.79 12.315±4.37 31.335±5.38 37.644±12.72

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001MO CIL_0001MO_0002 CGP 7:127256959-127273919

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001887 IDA selenium compound metabolic process
GO:0004756 IDA selenide, water dikinase activity
GO:0005524 IEA ATP binding
GO:0016260 IMP selenocysteine biosynthetic process
GO:0016310 IEA phosphorylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000478753 SEPHS2-001 protein_coding Homo_sapiens 0 1452
ENST00000511618 SEPHS2P1-001 processed_pseudogene Homo_sapiens 0 952

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