C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: pregnancy-associated plasma protein A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000084501 Pappa-001 ENSMUSG00000028370 10090 + 4:65124174-65357509 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000084501
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000084501 1.213±1.02 0.047±0.02 0.223±0.02 0.173±0.03 0.239±0.03 0.307±0.10 0.074±0.00 0.600±0.12 0.015±0.01 0.188±0.03 0.033±0.01 1.037±0.31 0.097±0.04 0.535±0.48

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008GA CIL_0008GA_0002 VISTA 4:64937235-65539737
CIL_0004FO CIL_0004FO_0002 CGP 4:65124174-66404611

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004175 IDA endopeptidase activity
GO:0005576 IEA extracellular region
GO:0006508 IEA proteolysis
GO:0008237 IEA metallopeptidase activity
GO:0016020 IEA membrane
GO:0030154 IEA cell differentiation
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000328252 PAPPA-001 protein_coding Homo_sapiens 0 6959
ENST00000460463 PAPPA-002 processed_transcript Homo_sapiens 0 361

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