C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 31, member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000084526 Slc31a1-001 ENSMUSG00000066150 10090 + 4:62360727-62391769 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000084526
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000084526 15.323±0.13 14.216±1.00 7.287±1.14 10.296±6.81 9.797±1.09 31.581±2.80 7.422±0.33 41.124±3.20 46.202±18.88 22.214±1.86 4.318±0.24 15.855±3.53 18.855±11.02 8.153±3.55

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000PB CIL_0000PB_0002 CGP 4:62300342-62391769
CIL_0002CC CIL_0002CC_0003 CGP 4:62360727-62408642

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005737 IEA cytoplasm
GO:0005770 IDA late endosome
GO:0005886 IEA plasma membrane
GO:0006855 IEA drug transmembrane transport
GO:0006878 IGI cellular copper ion homeostasis
GO:0015088 IMP copper uptake transmembrane transporter activity
GO:0015677 IMP copper ion import
GO:0016021 IEA integral component of membrane
GO:0035434 IEA copper ion transmembrane transport
GO:0043025 IEA neuronal cell body
GO:0055037 IDA recycling endosome
GO:0072719 IEA cellular response to cisplatin
GO:1902861 IEA copper ion import into cell

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000374212 SLC31A1-001 protein_coding Homo_sapiens 0 791
ENST00000451221 SLC31A1P1-001 processed_pseudogene Homo_sapiens 0 640

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