C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sperm associated antigen 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000084646 Spag8-001 ENSMUSG00000066196 10090 - 4:43651335-43653552 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000084646
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000084646 0.152±0.05 0.162±0.00 0.236±0.00 1.470±0.93 0.163±0.03 0.456±0.12 0.154±0.10 0.712±0.14 0.134±0.06 2.873±0.46 0.122±0.09 4.306±1.71 0.176±0.07 23.927±10.26

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006IC CIL_0006IC_0002 CGP 4:43631935-43653594
CIL_0007BQ CIL_0007BQ_0002 CGP 4:43651335-43656466

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0008017 IEA microtubule binding
GO:0032092 IDA positive regulation of protein binding
GO:0045944 IGI positive regulation of transcription from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000340291 SPAG8-001 protein_coding Homo_sapiens 0 479
ENST00000396638 SPAG8-010 protein_coding Homo_sapiens 0 628
ENST00000460836 SPAG8-012 retained_intron Homo_sapiens 0 420
ENST00000463889 SPAG8-005 processed_transcript Homo_sapiens 0 355
ENST00000471631 SPAG8-004 nonsense_mediated_decay Homo_sapiens 0 230
ENST00000472605 SPAG8-003 nonsense_mediated_decay Homo_sapiens 0 226
ENST00000475644 SPAG8-002 nonsense_mediated_decay Homo_sapiens 0 483
ENST00000479751 SPAG8-008 processed_transcript Homo_sapiens 0 628
ENST00000484764 SPAG8-009 protein_coding Homo_sapiens 0 529
ENST00000495667 SPAG8-007 nonsense_mediated_decay Homo_sapiens 0 307
ENST00000497810 SPAG8-011 protein_coding Homo_sapiens 0 628
ENST00000620013 SPAG8-201 protein_coding Homo_sapiens 0 483

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