C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cysteine rich protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000084882 Crip2-201 ENSMUSG00000006356 10090 + 12:113140236-113145504 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000084882
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000084882 153.706±40.86 52.803±9.05 135.508±16.19 98.568±40.47 103.339±39.99 55.968±19.77 1086.280±132.68 82.932±10.12 56.255±28.77 555.676±41.96 15.326±2.34 119.817±44.10 57.744±19.19 67.825±30.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006HA CIL_0006HA_0002 CGP 12:113098278-113145504
CIL_0006HB CIL_0006HB_0002 CGP 12:113140236-113153877

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005938 IDA cell cortex
GO:0008270 IEA zinc ion binding
GO:0008284 IDA positive regulation of cell proliferation
GO:0030097 IDA hemopoiesis
GO:0031012 IEA extracellular matrix

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000152674 protein_coding Danio_rerio 7e-26 122
ENST00000274990 CRIP3-004 protein_coding Homo_sapiens 5e-35 152
ENST00000329146 CRIP2-001 protein_coding Homo_sapiens 0 806
ENST00000372569 CRIP3-001 protein_coding Homo_sapiens 6e-35 152
ENST00000483017 CRIP2-002 protein_coding Homo_sapiens 0 671
ENST00000538259 CRIP2-009 protein_coding Homo_sapiens 0 551
ENST00000547643 CRIP2-006 retained_intron Homo_sapiens 0 628
ENST00000548309 CRIP2-004 processed_transcript Homo_sapiens 0 671
ENST00000548923 CRIP2-011 processed_transcript Homo_sapiens 0 270
ENST00000548989 CRIP2-003 processed_transcript Homo_sapiens 0 671
ENST00000551836 CRIP2-010 retained_intron Homo_sapiens 0 407

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